Exploiting hPSCs-derived kidney organoids to study the mechanobiology of nephrogenesis

dc.contributor
Universitat de Barcelona. Facultat de Medicina i Ciències de la Salut
dc.contributor.author
Nauryzgaliyeva, Zarina
dc.date.accessioned
2025-02-17T09:44:47Z
dc.date.issued
2024-11-08
dc.identifier.uri
http://hdl.handle.net/10803/693695
dc.description
Programa de Doctorat en Biomedicina / Tesi realitzada a l'Institut de Bioenginyeria de Catalunya (IBEC)
ca
dc.description.abstract
[eng] The isolation and generation of human pluripotent stem cells (hPSCs) has allowed research in human organogenesis to excel, by allowing the reproduction of the fundamental principles of tissue morphogenesis in vitro. Particularly in the field of kidney development, cutting edge research has led to the successful generation of kidney organoids from hPSCs by mimicking in vitro biochemical renal inductive signals that occur during organogenesis. However, tissue formation and morphogenesis don’t solely rely on biochemical and genetic instructions they are also influenced by mechanical signals that drive migration, differentiation, and growth within the forming organ, regulated through local internal forces and dynamics of ECM stiffness and viscosity. While the key morphogens and signalling pathways involved in kidney morphogenesis have been identified, the role of mechanical cues during kidney development and formation of congenital anomalies of the kidneys and urinary tract (CAKUT) has remained elusive. This thesis describes the development of a high throughput system for 2D kidney differentiation (namely RV emergence and nephron-like formation) on soft PDMS substrates which allows the exposure of hPSCs-derived kidney progenitor cells to physical constraints in the form of substrate rigidity and geometry, compatible with traction force measurements. We have validated the system for supporting RV emergence and nephron-like formation in 2D in the background of male ES[4] and female CB40 kidney progenitor cells, as well as measured traction forces exerted by kidney progenitors in wildtype and CAKUT-related phenotypes. We found that wildtype kidney progenitors exert increasing traction forces as differentiation progresses, while in the CAKUT-related backgrounds these forces are diminished. We identified a correlation between extent of kidney differentiation and exposure to increasing curvature of micropattern geometry. In this regard, wildtype progenitors seeded on triangular geometries displayed lower extent of differentiation (as described by immunofluorescence expression) and higher traction forces compared to circle and square counterparts. As such, our experimental pipeline and quantitative analysis have set the bases for further experiments to mechanistically couple how RV emergence and nephron differentiation is driven by changes in the expression of specific renal markers and cell force generation.
ca
dc.format.extent
206 p.
ca
dc.language.iso
eng
ca
dc.publisher
Universitat de Barcelona
dc.rights.license
ADVERTIMENT. Tots els drets reservats. L'accés als continguts d'aquesta tesi doctoral i la seva utilització ha de respectar els drets de la persona autora. Pot ser utilitzada per a consulta o estudi personal, així com en activitats o materials d'investigació i docència en els termes establerts a l'art. 32 del Text Refós de la Llei de Propietat Intel·lectual (RDL 1/1996). Per altres utilitzacions es requereix l'autorització prèvia i expressa de la persona autora. En qualsevol cas, en la utilització dels seus continguts caldrà indicar de forma clara el nom i cognoms de la persona autora i el títol de la tesi doctoral. No s'autoritza la seva reproducció o altres formes d'explotació efectuades amb finalitats de lucre ni la seva comunicació pública des d'un lloc aliè al servei TDX. Tampoc s'autoritza la presentació del seu contingut en una finestra o marc aliè a TDX (framing). Aquesta reserva de drets afecta tant als continguts de la tesi com als seus resums i índexs.
ca
dc.source
TDX (Tesis Doctorals en Xarxa)
dc.subject
Cèl·lules mare
ca
dc.subject
Células madre
ca
dc.subject
Stem cells
ca
dc.subject
Ronyó
ca
dc.subject
Riñón
ca
dc.subject
Kidney
ca
dc.subject
Organogènesi
ca
dc.subject
Organogénesis
ca
dc.subject
Organogenesis
ca
dc.subject.other
Ciències de la Salut
ca
dc.title
Exploiting hPSCs-derived kidney organoids to study the mechanobiology of nephrogenesis
ca
dc.type
info:eu-repo/semantics/doctoralThesis
dc.type
info:eu-repo/semantics/publishedVersion
dc.subject.udc
577
ca
dc.contributor.director
Montserrat Pulido, Núria
dc.contributor.director
Trepat Guixer, Xavier
dc.contributor.tutor
Trepat Guixer, Xavier
dc.embargo.terms
12 mesos
ca
dc.date.embargoEnd
2025-11-08T01:00:00Z
dc.rights.accessLevel
info:eu-repo/semantics/embargoedAccess


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